After DNA fragmentation or shearing, the library construction process for next-generation sequencing requires mainly platform-independent fragment selection. CD Genomics offers Covaris S220 Ultrasonicator-based DNA shearing and size selection services.
Specifications
1. The instrument uses sonication that is highly focused toward a tube holder that precisely positions sample tubes to receive the energy. The principle is explained at the Covaris web site.
2. Since the energy is highly focused there is little or no heating of samples.
3. The instrument utilizes specialized sample tubes and holders. We have a wide range of tube sizes and matching holders that permit shear volumes of 50 µL up to 2 mL. The most popular tube is the Microtube which includes an AFA fiber in the tube to enhance shearing. These tubes are Covaris snap cap and have a volume of 130 µL.
4. Shearing of DNA uses predefined conditions and is mostly concentration independent so low and high concentration samples can be sheared using the same reproducible conditions.
5. We have found however that preset conditions may not work for all samples so optimization may be required.
1. This instrument can used by customers for precisely shearing DNA in preparation for Illumina sequencing and other applications.
2. Computer-controlled shearing of DNA ensures a high degree of reproducibility with minimum heating of samples.
3. The instrument is well suited to different sample types including genomic DNA and ChIPSeq where more energy is required without sample heating.
4. Other applications include protein preparation.
5. The Genomics Core also uses the Covaris for preparation of customer samples for Illumina sequencing.
If you are interested, please contact us directly for assistance.
For research use only, not intended for any clinical use.
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